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Bayesian discrete lognormal regression model for genomic prediction
Journal article   Peer reviewed

Bayesian discrete lognormal regression model for genomic prediction

Abelardo Montesinos-López, Humberto Gutiérrez-Pulido, Sofía Ramos-Pulido, José Cricelio Montesinos-López, Osval A Montesinos-López and José Crossa
Theoretical and applied genetics, Vol.137(1), 21
2024
PMID: 38221602

Abstract

Animals Bayes Theorem Genome Genomics - methods Humans Models, Genetic Phenotype Plant Breeding
Genomic prediction models for quantitative traits assume continuous and normally distributed phenotypes. In this research, we proposed a novel Bayesian discrete lognormal regression model. Genomic selection is a powerful tool in modern breeding programs that uses genomic information to predict the performance of individuals and select those with desirable traits. It has revolutionized animal and plant breeding, as it allows breeders to identify the best candidates without labor-intensive and time-consuming phenotypic evaluations. While several statistical models have been developed, most of them have been for quantitative continuous traits and only a few for count responses. In this paper, we propose a discrete lognormal regression model in the Bayesian context, that with a Gibbs sampler to explore the corresponding posterior distribution and make the predictions. Two datasets of resistance disease is used in the wheat crop and are then evaluated against the traditional Gaussian model and a lognormal model. The results indicate the proposed model is a competitive and natural model for predicting count genomic traits.

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Collaboration types
Domestic collaboration
International collaboration
Citation topics
3 Agriculture, Environment & Ecology
3.51 Dairy & Animal Sciences
3.51.115 Livestock Reproduction
Web Of Science research areas
Agronomy
Genetics & Heredity
Horticulture
Plant Sciences
ESI research areas
Agricultural Sciences
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