Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T

W. Reeve; K. Nandasena; R. Yates; R. Tiwari; G. O’Hara; M. Ninawi; O. Chertkov; L. Goodwin; D. Bruce; C. Detter; R. Tapia; S. Han; T. Woyke; S. Pitluck; M. Nolan; M. Land; A. Copeland; K. Liolios; A. Pati; K. Mavromatis; V. Markowitz; N. Kyrpides; N. Ivanova; U. Meenakshi; J. Howieson

doi:10.4056/sigs.4538264

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Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T

Journal article

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Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T

W. Reeve, K. Nandasena, R. Yates, R. Tiwari, G. O’Hara, M. Ninawi, O. Chertkov, L. Goodwin, D. Bruce, C. Detter, …

Standards in Genomic Sciences, Vol.9(2), pp.294-303

2013

DOI: https://doi.org/10.4056/sigs.4538264

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Abstract

Mesorhizobium opportunistum strain WSM2075T was isolated in Western Australia in 2000 from root nodules of the pasture legume Biserrula pelecinus that had been inoculated with M. ciceri bv. biserrulae WSM1271. WSM2075T is an aerobic, motile, Gram negative, non-spore-forming rod that has gained the ability to nodulate B. pelecinus but is completely ineffective in N2 fixation with this host. This report reveals that the genome of M. opportunistum strain WSM2075T contains a chromosome of size 6,884,444 bp, encoding 6,685 protein-coding genes and 62 RNA-only encoding genes. The genome contains no plasmids, but does harbor a 455.7 kb genomic island from Mesorhizobium ciceri bv. biserrulae WSM1271 that has been integrated into a phenylalanine-tRNA gene.

Details

Title: Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075T
Authors/Creators: W. Reeve (Author/Creator) - Murdoch University
K. Nandasena (Author/Creator) - Murdoch University
R. Yates (Author/Creator) - Murdoch University
R. Tiwari (Author/Creator) - Murdoch University
G. O’Hara (Author/Creator) - Murdoch University
M. Ninawi (Author/Creator) - Murdoch University
O. Chertkov (Author/Creator) - Los Alamos National Laboratory
L. Goodwin (Author/Creator) - Los Alamos National Laboratory
D. Bruce (Author/Creator) - Los Alamos National Laboratory
C. Detter (Author/Creator) - Los Alamos National Laboratory
R. Tapia (Author/Creator) - Los Alamos National Laboratory
S. Han (Author/Creator) - Los Alamos National Laboratory
T. Woyke (Author/Creator) - Joint Genome Institute
S. Pitluck (Author/Creator) - Joint Genome Institute
M. Nolan (Author/Creator) - Joint Genome Institute
M. Land (Author/Creator) - Oak Ridge National Laboratory
A. Copeland (Author/Creator) - Joint Genome Institute
K. Liolios (Author/Creator) - Joint Genome Institute
A. Pati (Author/Creator) - Joint Genome Institute
K. Mavromatis (Author/Creator) - Joint Genome Institute
V. Markowitz (Author/Creator) - Lawrence Berkeley National Laboratory
N. Kyrpides (Author/Creator) - Joint Genome Institute
N. Ivanova (Author/Creator) - Joint Genome Institute
L. Goodwin (Author/Creator) - Los Alamos National Laboratory
U. Meenakshi (Author/Creator) - Murdoch University
J. Howieson (Author/Creator) - Murdoch University
Publication Details: Standards in Genomic Sciences, Vol.9(2), pp.294-303
Publisher: Genomic Standards Consortium
Identifiers: 991005542672007891
Copyright: © Reeve et al. 2013
Murdoch Affiliation: Centre for Rhizobium Studies
Language: English
Resource Type: Journal article

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Collaboration types: Domestic collaboration; International collaboration
Citation topics: 3 Agriculture, Environment & Ecology; 3.97 Plant Pathology; 3.97.892 Rhizobium-Legume Symbiosis
Web Of Science research areas: Genetics & Heredity; Microbiology
ESI research areas: Molecular Biology & Genetics