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Fully automatic assignment of small molecules' NMR spectra without relying on chemical shift predictions
Journal article   Peer reviewed

Fully automatic assignment of small molecules' NMR spectra without relying on chemical shift predictions

Andres M. Castillo, Andres Bernal, Luc Patiny and Julien Wist
Magnetic resonance in chemistry, Vol.53(8), pp.603-611
2015
PMID: 26053353

Abstract

Chemistry Chemistry, Multidisciplinary Chemistry, Physical Physical Sciences Science & Technology Spectroscopy Technology
We present a method for the automatic assignment of small molecules' NMR spectra. The method includes an automatic and novel self-consistent peak-picking routine that validates NMR peaks in each spectrum against peaks in the same or other spectra that are due to the same resonances. The auto-assignment routine used is based on branch-and-bound optimization and relies predominantly on integration and correlation data; chemical shift information may be included when available to fasten the search and shorten the list of viable assignments, but in most cases tested, it is not required in order to find the correct assignment. This automatic assignment method is implemented as a web-based tool that runs without any user input other than the acquired spectra.

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Collaboration types
Domestic collaboration
International collaboration
Citation topics
2 Chemistry
2.123 Protein Stucture, Folding & Modelling
2.123.248 Solid-State NMR
Web Of Science research areas
Chemistry, Multidisciplinary
Chemistry, Physical
Spectroscopy
ESI research areas
Chemistry
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