Journal article
High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym
Standards in Genomic Sciences, Vol.10(1)
2015
Abstract
Mesorhizobium loti strain CJ3Sym was isolated in 1998 following transfer of the integrative and conjugative element ICEMlSymR7A, also known as the R7A symbiosis island, in a laboratory mating from the donor M. loti strain R7A to a nonsymbiotic recipient Mesorhizobium strain CJ3. Strain CJ3 was originally isolated from a field site in the Rocklands range in New Zealand in 1994. CJ3Sym is an aerobic, Gram-negative, non-spore-forming rod. This report reveals the genome of M. loti strain CJ3Sym currently comprises 70 scaffolds totaling 7,563,725 bp. The high-quality draft genome is arranged in 70 scaffolds of 71 contigs, contains 7,331 protein-coding genes and 70 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.
Details
- Title
- High-Quality draft genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain CJ3Sym
- Authors/Creators
- W. Reeve (Author/Creator) - Murdoch UniversityJ. Sullivan (Author/Creator)C. Ronson (Author/Creator) - University of OtagoR. Tian (Author/Creator) - Murdoch UniversityC. Munk (Author/Creator) - Los Alamos National LaboratoryC. Han (Author/Creator) - Los Alamos National LaboratoryT.B.K. Reddy (Author/Creator) - Joint Genome InstituteR. Seshadri (Author/Creator) - Joint Genome InstituteT. Woyke (Author/Creator) - Joint Genome InstituteA. Pati (Author/Creator) - Joint Genome InstituteV. Markowitz (Author/Creator) - Lawrence Berkeley National LaboratoryN. Ivanova (Author/Creator) - Joint Genome InstituteN. Kyrpides (Author/Creator) - King Abdulaziz University
- Publication Details
- Standards in Genomic Sciences, Vol.10(1)
- Publisher
- Genomic Standards Consortium
- Identifiers
- 991005545422407891
- Copyright
- © 2015 Reeve et al.
- Murdoch Affiliation
- Murdoch University
- Language
- English
- Resource Type
- Journal article
UN Sustainable Development Goals (SDGs)
This output has contributed to the advancement of the following goals:
Source: InCites
Metrics
128 File views/ downloads
37 Record Views
InCites Highlights
These are selected metrics from InCites Benchmarking & Analytics tool, related to this output
- Collaboration types
- Domestic collaboration
- International collaboration
- Citation topics
- 3 Agriculture, Environment & Ecology
- 3.97 Plant Pathology
- 3.97.892 Rhizobium-Legume Symbiosis
- Web Of Science research areas
- Genetics & Heredity
- Microbiology
- ESI research areas
- Molecular Biology & Genetics