High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica

R. Tian; M. Parker; R. Seshadri; T.B.K. Reddy; V. Markowitz; N. Ivanova; A. Pati; T. Woyke; M. Baeshen; N. Baeshen; N. Kyrpides; W. Reeve

doi:10.1186/s40793-015-0007-z

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High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica

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High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica

R. Tian, M. Parker, R. Seshadri, T.B.K. Reddy, V. Markowitz, N. Ivanova, A. Pati, T. Woyke, M. Baeshen, N. Baeshen, …

Standards in Genomic Sciences, Vol.10(1)

2015

DOI: https://doi.org/10.1186/s40793-015-0007-z

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Abstract

Bradyrhizobium sp. Ai1a-2 is is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective nitrogen fixing root nodule of Andira inermis collected from Tres Piedras in Costa Rica. In this report we describe, for the first time, the genome sequence information and annotation of this legume microsymbiont. The 9,029,266 bp genome has a GC content of 62.56% with 247 contigs arranged into 246 scaffolds. The assembled genome contains 8,482 protein-coding genes and 102 RNA-only encoding genes. This rhizobial genome was sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project proposal.

Details

Title: High-quality permanent draft genome sequence of Bradyrhizobium sp. Ai1a-2; a microsymbiont of Andira inermis discovered in Costa Rica
Authors/Creators: R. Tian (Author/Creator) - Murdoch University
M. Parker (Author/Creator) - Binghamton University
R. Seshadri (Author/Creator) - Joint Genome Institute
T.B.K. Reddy (Author/Creator) - Joint Genome Institute
V. Markowitz (Author/Creator) - Lawrence Berkeley National Laboratory
N. Ivanova (Author/Creator) - Joint Genome Institute
A. Pati (Author/Creator) - Joint Genome Institute
T. Woyke (Author/Creator) - Joint Genome Institute
M. Baeshen (Author/Creator) - King Abdulaziz University
N. Baeshen (Author/Creator) - King Abdulaziz University
N. Kyrpides (Author/Creator) - King Abdulaziz University
W. Reeve (Author/Creator) - Murdoch University
Publication Details: Standards in Genomic Sciences, Vol.10(1)
Publisher: Genomic Standards Consortium
Identifiers: 991005544978207891
Murdoch Affiliation: Centre for Rhizobium Studies
Language: English
Resource Type: Journal article

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Collaboration types: Domestic collaboration; International collaboration
Citation topics: 3 Agriculture, Environment & Ecology; 3.97 Plant Pathology; 3.97.892 Rhizobium-Legume Symbiosis
Web Of Science research areas: Genetics & Heredity; Microbiology
ESI research areas: Molecular Biology & Genetics