Journal article
High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus
Theoretical and Applied Genetics, Vol.128(6), pp.1039-1047
2015
Abstract
The growth of next-generation DNA sequencing technologies has led to a rapid increase in sequence-based genotyping for applications including diversity assessment, genome structure validation and gene–trait association. We have established a skim-based genotyping by sequencing method for crop plants and applied this approach to genotype-segregating populations of Brassica napus and Cicer arietinum. Comparison of progeny genotypes with those of the parental individuals allowed the identification of crossover and non-crossover (gene conversion) events. Our results identify the positions of recombination events with high resolution, permitting the mapping and frequency assessment of recombination in segregating populations.
Details
- Title
- High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus
- Authors/Creators
- P.E. Bayer (Author/Creator) - The University of Western AustraliaP. Ruperao (Author/Creator) - International Crops Research Institute for the Semi-Arid TropicsA.S. Mason (Author/Creator) - The University of QueenslandJ. Stiller (Author/Creator) - Commonwealth Scientific and Industrial Research OrganisationC-K.K. Chan (Author/Creator) - The University of QueenslandS. Hayashi (Author/Creator) - The University of QueenslandY. Long (Author/Creator) - Huazhong Agricultural UniversityJ. Meng (Author/Creator) - Huazhong Agricultural UniversityT. Sutton (Author/Creator) - The University of AdelaideP. Visendi (Author/Creator) - The University of QueenslandR.K. Varshney (Author/Creator) - International Crops Research Institute for the Semi-Arid TropicsJ. Batley (Author/Creator) - The University of Western AustraliaD. Edwards (Author/Creator) - The University of Queensland
- Publication Details
- Theoretical and Applied Genetics, Vol.128(6), pp.1039-1047
- Publisher
- Springer Verlag
- Identifiers
- 991005542405407891
- Murdoch Affiliation
- Murdoch University
- Language
- English
- Resource Type
- Journal article
UN Sustainable Development Goals (SDGs)
This output has contributed to the advancement of the following goals:
Source: InCites
Metrics
190 File views/ downloads
70 Record Views
InCites Highlights
These are selected metrics from InCites Benchmarking & Analytics tool, related to this output
- Collaboration types
- Domestic collaboration
- International collaboration
- Citation topics
- 3 Agriculture, Environment & Ecology
- 3.4 Crop Science
- 3.4.96 QTL
- Web Of Science research areas
- Agronomy
- Genetics & Heredity
- Horticulture
- Plant Sciences
- ESI research areas
- Agricultural Sciences