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Published (Version of Record)CC BY-NC-ND V4.0, Open Access
Journal article
The conservation of gene models can support genome annotation
The plant genome, Vol.16(3), e20377
2023
Abstract
Many genome annotations include false-positive gene models, leading to errors in phylogenetic and comparative studies. Here, we propose a method to support gene model prediction based on evolutionary conservation and use it to identify potentially erroneous annotations. Using this method, we developed a set of 15,345 representative gene models from 12 legume assemblies that can be used to support genome annotations for other legumes.
Details
- Title
- The conservation of gene models can support genome annotation
- Authors/Creators
- Cassandria G Tay FernandezPhilipp E Bayer - The University of Western AustraliaJakob Petereit - The University of Western AustraliaRajeev Varshney - Murdoch University, Food Futures InstituteJacqueline Batley - The University of Western AustraliaDavid Edwards - The University of Western Australia
- Publication Details
- The plant genome, Vol.16(3), e20377
- Publisher
- Wiley Periodicals LLC on behalf of Crop Science Society of America.
- Identifiers
- 991005599162207891
- Copyright
- © 2023 The Authors.
- Murdoch Affiliation
- Centre for Crop and Food Innovation; State Agricultural Biotechnology Centre
- Language
- English
- Resource Type
- Journal article
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- Collaboration types
- Domestic collaboration
- International collaboration
- Citation topics
- 3 Agriculture, Environment & Ecology
- 3.4 Crop Science
- 3.4.96 QTL
- Web Of Science research areas
- Genetics & Heredity
- Plant Sciences
- ESI research areas
- Plant & Animal Science