The transcriptional landscape of polyploid wheat

R.H. Ramirez-Gonzalez; P. Borrill; D. Lang; S.A. Harrington; J. Brinton; L. Venturini; M. Davey; J. Jacobs; F. van Ex; A. Pasha; Y. Khedikar; S.J. Robinson; A.T. Cory; T. Florio; L. Concia; C. Juery; H. Schoonbeek; B. Steuernagel; D. Xiang; C.J. Ridout; B. Chalhoub; K.F.X. Mayer; M. Benhamed; D. Latrasse; A. Bendahmane; B.B.H. Wulff; R. Appels; V. Tiwari; R. Datla; F. Choulet; C.J. Pozniak; N.J. Provart; A.G. Sharpe; E. Paux; M. Spannagl; A. Bräutigam; C. Uauy

doi:10.1126/science.aar6089

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The transcriptional landscape of polyploid wheat

Journal article

Peer reviewed

The transcriptional landscape of polyploid wheat

R.H. Ramirez-Gonzalez, P. Borrill, D. Lang, S.A. Harrington, J. Brinton, L. Venturini, M. Davey, J. Jacobs, F. van Ex, A. Pasha, …

Science, Vol.361(6403)

2018

DOI: https://doi.org/10.1126/science.aar6089

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Abstract

Wheat is one of the major sources of food for much of the world. However, because bread wheat's genome is a large hybrid mix of three separate subgenomes, it has been difficult to produce a high-quality reference sequence. Using recent advances in sequencing, the International Wheat Genome Sequencing Consortium presents an annotated reference genome with a detailed analysis of gene content among subgenomes and the structural organization for all the chromosomes. Examples of quantitative trait mapping and CRISPR-based genome modification show the potential for using this genome in agricultural research and breeding. Ramírez-González et al. exploited the fruits of this endeavor to identify tissue-specific biased gene expression and coexpression networks during development and exposure to stress. These resources will accelerate our understanding of the genetic basis of bread wheat.

Details

Title: The transcriptional landscape of polyploid wheat
Authors/Creators: R.H. Ramirez-Gonzalez (Author/Creator)
P. Borrill (Author/Creator) - Norwich Research Park
D. Lang (Author/Creator) - Helmholtz Zentrum München
S.A. Harrington (Author/Creator) - Norwich Research Park
J. Brinton (Author/Creator) - Norwich Research Park
L. Venturini (Author/Creator) - Norwich Research Park
M. Davey (Author/Creator) - Bayer (Germany)
J. Jacobs (Author/Creator) - Bayer (Germany)
F. van Ex (Author/Creator) - Bayer (Germany)
A. Pasha (Author/Creator) - University of Toronto
Y. Khedikar (Author/Creator) - Agriculture and Agri-Food Canada
S.J. Robinson (Author/Creator) - Agriculture and Agri-Food Canada
A.T. Cory (Author/Creator) - University of Saskatchewan
T. Florio (Author/Creator) - Norwich Research Park
L. Concia (Author/Creator) - Délégation Paris 7
C. Juery (Author/Creator) - Génétique, Diversité, Écophysiologie des Céréales
H. Schoonbeek (Author/Creator) - Norwich Research Park
B. Steuernagel (Author/Creator) - Norwich Research Park
D. Xiang (Author/Creator) - Aquatic and Crop Resource Development, National Research Council Canada, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9, Canada.
C.J. Ridout (Author/Creator) - Norwich Research Park
B. Chalhoub (Author/Creator) - Evry (Norway)
K.F.X. Mayer (Author/Creator) - Technical University of Munich
M. Benhamed (Author/Creator) - Délégation Paris 7
D. Latrasse (Author/Creator) - Délégation Paris 7
A. Bendahmane (Author/Creator) - Délégation Paris 7
B.B.H. Wulff (Author/Creator) - Norwich Research Park
R. Appels (Author/Creator) - La Trobe University
V. Tiwari (Author/Creator) - University of Maryland, College Park
R. Datla (Author/Creator) - Aquatic and Crop Resource Development, National Research Council Canada, 110 Gymnasium Place, Saskatoon, SK, S7N 0W9, Canada.
F. Choulet (Author/Creator) - Génétique, Diversité, Écophysiologie des Céréales
C.J. Pozniak (Author/Creator) - University of Saskatchewan
N.J. Provart (Author/Creator) - University of Toronto
A.G. Sharpe (Author/Creator) - University of Saskatchewan
E. Paux (Author/Creator) - Génétique, Diversité, Écophysiologie des Céréales
M. Spannagl (Author/Creator) - Helmholtz Zentrum München
A. Bräutigam (Author/Creator) - Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK)
C. Uauy (Author/Creator) - Norwich Research Park
Publication Details: Science, Vol.361(6403)
Publisher: American Association for the Advancement of Science
Identifiers: 991005543911407891
Copyright: © 2018 American Association for the Advancement of Science
Murdoch Affiliation: School of Veterinary and Life Sciences
Language: English
Resource Type: Journal article

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Collaboration types: Industry collaboration; Domestic collaboration; International collaboration
Citation topics: 3 Agriculture, Environment & Ecology; 3.4 Crop Science; 3.4.96 QTL
Web Of Science research areas: Plant Sciences
ESI research areas: Plant & Animal Science