Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005T

W.G. Reeve; S. De Meyer; J. Terpolilli; V. Melino; J. Ardley; R Tian; R. Tiwari; J. Howieson; R. Yates; G. O'Hara; M. Lu; D. Bruce; C. Detter; R. Tapia; C. Han; C-L Wei; M. Huntemann; J. Han; I-M Chen; K. Mavromatis; V. Markowitz; E. Szeto; N. Ivanova; N. Mikhailova; G. Ovchinnikova; I. Pagani; A. Pati; L. Goodwin; L. Peters; S. Pitluck; T. Woyke; N Kyrpides

doi:10.4056/sigs.4558268

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Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005T

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Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005T

W.G. Reeve, S. De Meyer, J. Terpolilli, V. Melino, J. Ardley, R Tian, R. Tiwari, J. Howieson, R. Yates, G. O'Hara, …

Standards in Genomic Sciences, Vol.9(2), pp.385-394

2013

DOI: https://doi.org/10.4056/sigs.4558268

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Abstract

Burkholderia sprentiae strain WSM5005T is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated in Australia from an effective N2-fixing root nodule of Lebeckia ambigua collected in Trawal, Western Cape of South Africa, in October 2007. Here we describe the features of Burkholderia sprentiae strain WSM5005T, together with the genome sequence and its annotation. The 7,761,063 bp high-quality-draft genome is arranged in 8 scaffolds of 236 contigs, contains 7,147 protein-coding genes and 76 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

Details

Title: Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005T
Authors/Creators: W.G. Reeve (Author/Creator)
S. De Meyer (Author/Creator)
J. Terpolilli (Author/Creator)
V. Melino (Author/Creator)
J. Ardley (Author/Creator)
R Tian (Author/Creator)
R. Tiwari (Author/Creator)
J. Howieson (Author/Creator)
R. Yates (Author/Creator)
G. O'Hara (Author/Creator)
M. Lu (Author/Creator)
D. Bruce (Author/Creator)
C. Detter (Author/Creator)
R. Tapia (Author/Creator)
C. Han (Author/Creator)
C-L Wei (Author/Creator)
M. Huntemann (Author/Creator)
J. Han (Author/Creator)
I-M Chen (Author/Creator)
K. Mavromatis (Author/Creator)
V. Markowitz (Author/Creator)
E. Szeto (Author/Creator)
N. Ivanova (Author/Creator)
N. Mikhailova (Author/Creator)
G. Ovchinnikova (Author/Creator)
I. Pagani (Author/Creator)
A. Pati (Author/Creator)
L. Goodwin (Author/Creator)
L. Peters (Author/Creator)
S. Pitluck (Author/Creator)
T. Woyke (Author/Creator)
N Kyrpides (Author/Creator)
Publication Details: Standards in Genomic Sciences, Vol.9(2), pp.385-394
Publisher: Genomic Standards Consortium
Identifiers: 991005544290707891
Copyright: © Reeve et al. 2013
Murdoch Affiliation: Centre for Rhizobium Studies
Language: English
Resource Type: Journal article

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Collaboration types: Domestic collaboration; International collaboration
Citation topics: 3 Agriculture, Environment & Ecology; 3.83 Bioengineering; 3.83.167 Microbial Diversity
Web Of Science research areas: Genetics & Heredity; Microbiology
ESI research areas: Molecular Biology & Genetics