Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

W.G. Reeve; R Tian; S. De Meyer; V. Melino; J. Terpolilli; J. Ardley; R. Tiwari; J. Howieson; R. Yates; G. O'Hara; M. Ninawi; H. Teshima; D. Bruce; C. Detter; R. Tapia; C. Han; C-L Wei; M. Huntemann; J. Han; I-M Chen; K. Mavromatis; V. Markowitz; N. Ivanova; G. Ovchinnikova; I. Pagani; A. Pati; L. Goodwin; S. Pitluck; T. Woyke; N Kyrpides

doi:10.4056/sigs.4488254

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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1

W.G. Reeve, R Tian, S. De Meyer, V. Melino, J. Terpolilli, J. Ardley, R. Tiwari, J. Howieson, R. Yates, G. O'Hara, …

Standards in Genomic Sciences, Vol.9(2), pp.243-253

2013

DOI: https://doi.org/10.4056/sigs.4488254

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Abstract

Rhizobium leguminosarum bv. trifolii strain TA1 is an aerobic, motile, Gram-negative, non-spore-forming rod that is an effective nitrogen fixing microsymbiont on the perennial clovers originating from Europe and the Mediterranean basin. TA1 however is ineffective with many annual and perennial clovers originating from Africa and America. Here we describe the features of R. leguminosarum bv. trifolii strain TA1, together with genome sequence information and annotation. The 8,618,824 bp high-quality-draft genome is arranged in a 6 scaffold of 32 contigs, contains 8,493 protein-coding genes and 83 RNA-only encoding genes, and is one of 20 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Community Sequencing Program.

Details

Title: Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1
Authors/Creators: W.G. Reeve (Author/Creator)
R Tian (Author/Creator)
S. De Meyer (Author/Creator)
V. Melino (Author/Creator)
J. Terpolilli (Author/Creator)
J. Ardley (Author/Creator)
R. Tiwari (Author/Creator)
J. Howieson (Author/Creator)
R. Yates (Author/Creator)
G. O'Hara (Author/Creator)
M. Ninawi (Author/Creator)
H. Teshima (Author/Creator)
D. Bruce (Author/Creator)
C. Detter (Author/Creator)
R. Tapia (Author/Creator)
C. Han (Author/Creator)
C-L Wei (Author/Creator)
M. Huntemann (Author/Creator)
J. Han (Author/Creator)
I-M Chen (Author/Creator)
K. Mavromatis (Author/Creator)
V. Markowitz (Author/Creator)
N. Ivanova (Author/Creator)
G. Ovchinnikova (Author/Creator)
I. Pagani (Author/Creator)
A. Pati (Author/Creator)
L. Goodwin (Author/Creator)
S. Pitluck (Author/Creator)
T. Woyke (Author/Creator)
N Kyrpides (Author/Creator)
Publication Details: Standards in Genomic Sciences, Vol.9(2), pp.243-253
Publisher: Genomic Standards Consortium
Identifiers: 991005544148107891
Copyright: © Reeve et al. 2013
Murdoch Affiliation: Centre for Rhizobium Studies
Language: English
Resource Type: Journal article

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Collaboration types: Domestic collaboration; International collaboration
Citation topics: 3 Agriculture, Environment & Ecology; 3.97 Plant Pathology; 3.97.892 Rhizobium-Legume Symbiosis
Web Of Science research areas: Genetics & Heredity; Microbiology
ESI research areas: Molecular Biology & Genetics