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Journal article
High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T
Standards in Genomic Sciences, Vol.10(1)
2015
Abstract
Burkholderia dilworthii strain WSM3556T is an aerobic, motile, Gram-negative, non-spore-forming rod that was isolated from an effective N2-fixing root nodule of Lebeckia ambigua collected near Grotto Bay Nature Reserve, in the Western Cape of South Africa, in October 2004. This plant persists in infertile and deep sandy soils with acidic pH, and is therefore an ideal candidate for a perennial based agriculture system in Western Australia. WSM3556T thus represents a potential inoculant quality strain for L. ambigua for which we describe the general features, together with genome sequence and annotation. The 7,679,067 bp high-quality permanent draft genome is arranged in 140 scaffolds of 141 contigs, contains 7,059 protein-coding genes and 64 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.
Details
- Title
- High-quality permanent draft genome sequence of the Lebeckia - nodulating Burkholderia dilworthii strain WSM3556T
- Authors/Creators
- S.E. De Meyer (Author/Creator) - Murdoch UniversityR. Tian (Author/Creator) - Murdoch UniversityR. Seshadri (Author/Creator) - Joint Genome InstituteN. Ivanova (Author/Creator) - Joint Genome InstituteA. Pati (Author/Creator) - Joint Genome InstituteV. Markowitz (Author/Creator) - Lawrence Berkeley National LaboratoryT. Woyke (Author/Creator) - Joint Genome InstituteR. Yates (Author/Creator) - Murdoch UniversityJ. Howieson (Author/Creator) - Murdoch UniversityN. Kyrpides (Author/Creator) - King Abdulaziz UniversityW. Reeve (Author/Creator) - Murdoch University
- Publication Details
- Standards in Genomic Sciences, Vol.10(1)
- Publisher
- BioMed Central
- Identifiers
- 991005541322807891
- Copyright
- © 2015 De Meyer et al.
- Murdoch Affiliation
- Centre for Rhizobium Studies
- Language
- English
- Resource Type
- Journal article
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